type OmicsListRunCommand @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  name: String!
  id: String
  arn: String
  creationTime: AWSDateTime
  priority: String
  workflowId: String!
  storageCapacity: String
  startTime: AWSDateTime
  stopTime: AWSDateTime
  status: String
}

type OmicsListWorkflow @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  id: String
  name: String
  creationTime: AWSDateTime
  status: String
  digest: String
  arn: String
  workflowId: String
}

type OmicsListRunTasks @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  name: String
  creationTime: AWSDateTime
  startTime: AWSDateTime
  status: String
  stopTime: AWSDateTime
  cpu: Int
  memory: Int
  taskId: String!
}

type OmicsListRunDetails @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  name: String!
  id: String
  arn: String
  creationTime: AWSDateTime
  priority: String
  workflowId: String!
  storageCapacity: String
  # startTime: 2023-02-16T04:16:04.619Z,
  startTime: AWSDateTime
  # stopTime: 2023-02-16T06:52:33.329Z,
  stopTime: AWSDateTime
  status: String
  tasks: [OmicsListRunTasks]
}

type OmicsGetRunCommandOutput
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  arn: String
  creationTime: String
  definition: String
  digest: String
  id: String
  logLevel: String
  name: String
  outputUri: String
  parameters: AWSJSON
  priority: String
  resourceDigests: AWSJSON
  roleArn: String
  runId: String
  startTime: AWSDateTime
  startedBy: String
  status: String
  statusMessage: String
  stopTime: AWSDateTime
  storageCapacity: Int
  workflowId: String
  workflowType: String
}

type OmicsStartRunCommandOutput
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  arn: String
  id: String
  status: String
}

type OmicsGetWorkflowCommand
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  arn: String
  definition: String
  description: String
  engine: String
  id: String
  name: String
  main: String
  parameterTemplate: AWSJSON
  storageCapacity: Int
  status: String
  tags: String
  type: String
}

type OmicsCreateWorkflowCommandOutput
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  arn: String
  id: String
  status: String
}

type EncryptionConfiguration {
  encryptionType: String
}

type ImageScanningConfiguration {
  scanOnPush: Boolean
}

type Repository {
  createdAt: AWSDateTime
  encryptionConfiguration: EncryptionConfiguration
  imageScanningConfiguration: ImageScanningConfiguration
  imageTagMutability: String
  registryId: String
  repositoryArn: String
  repositoryName: String
  repositoryUri: String
}

type CreateRepositoryCommandOutput
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  repository: Repository
}

type DescribeRepositoriesCommandOutput
  @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"]) {
  repositories: [Repository]
}

############################### Inputs ###############################

input OmicsStartRunCommandInput {
  logLevel: String
  name: String!
  outputUri: String!
  parameters: AWSJSON
  priority: String
  requestId: String
  runId: String
  storageCapacity: Float
  workflowId: String
  workflowType: String
}

input OmicsCreateWorkflowCommandInput {
  definitionUri: String
  definitionZip: [Int]
  description: String
  engine: String
  name: String
  parameterTemplate: AWSJSON
  requestId: String
  storageCapacity: Float
}

input EncryptionConfigurationInput {
  encryptionType: String
}

input ImageScanningConfigurationInput {
  scanOnPush: Boolean
}

input CreateRepositoryCommandInput {
  encryptionConfiguration: EncryptionConfigurationInput
  imageScanningConfiguration: ImageScanningConfigurationInput
  imageTagMutability: String
  registryId: String
  repositoryName: String!
}

############################### Queries ###############################
type Query {
  # ListWorkflow
  getListWorkflow(name: String, type: String): [OmicsListWorkflow]
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # ListRunCommand
  getListRunCommand: [OmicsListRunCommand]
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # ListRunTasks
  getListRunTasks(id: String!, status: String): [OmicsListRunTasks]
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # OmicsListRunDetails
  getListRunDetails: [OmicsListRunDetails]
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # GetRunCommand
  getRunCommand(id: String!): OmicsGetRunCommandOutput
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # GetWorkflowCommand
  getWorkflowCommand(id: String!): OmicsGetWorkflowCommand
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # DescribeRepositoriesCommand
  describeRepositoriesCommand: DescribeRepositoriesCommandOutput
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
}

############################### Mutations ###############################
type Mutation {
  # Start Run command
  startRunCommand(input: OmicsStartRunCommandInput!): OmicsStartRunCommandOutput
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # Create Workflow
  createWorkflowCommand(input: OmicsCreateWorkflowCommandInput!): OmicsCreateWorkflowCommandOutput
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
  # Create Repository
  createRepositoryCommand(input: CreateRepositoryCommandInput!): CreateRepositoryCommandOutput
    @aws_cognito_user_pools(cognito_groups: ["admin", "bioinformatician"])
}