---

#Some popular workflows from https://nf-co.re/pipelines

name: NFCorePopular
schemaVersion: 1
workflows:
  rnaseq:
    type:
      language: nextflow
      version: 1.0
    sourceURL: workflows/rnaseq
  sarek:
    type:
      language: nextflow
      version: 1.0
    sourceURL: workflows/sarek
  atacseq:
    type:
      language: nextflow
      version: 1.0
    sourceURL: workflows/atacseq
data:
  - location: s3://1000genomes
    readOnly: true
  - location: s3://ngi-igenomes
    readOnly: true
  - location: s3://encode-public
    readOnly: true
  - location: s3://nf-core-awsmegatests
    readOnly: true
  - location: s3://healthai-public-assets-us-east-1
    readOnly: true
contexts:
  bigMemCtx:
    instanceTypes:                     # Standard types plus r5.8xlarge due to memory requirements of some workflows like sarek
      - "c5.large"
      - "c5.xlarge"
      - "c5.2xlarge"
      - "c5.4xlarge"
      - "c5n.large"
      - "c5n.xlarge"
      - "c5n.2xlarge"
      - "c5n.4xlarge"
      - "m5.large"
      - "m5.xlarge"
      - "m5.2xlarge"
      - "m5.4xlarge"
      - "r5.large"
      - "r5.xlarge"
      - "r5.2xlarge"
      - "r5.4xlarge"
      - "r5.8xlarge"
      - "r5n.large"
      - "r5n.xlarge"
      - "r5n.2xlarge"
      - "r5n.4xlarge"
      - "r5n.8xlarge"
    engines:
      - type: nextflow
        engine: nextflow