#!/bin/bash

# Toil is a WES server and so it gets this custom entrypoint script

DEFAULT_AWS_CLI_PATH=/opt/aws-cli/bin/aws
AWS_CLI_PATH=${JOB_AWS_CLI_PATH:-$DEFAULT_AWS_CLI_PATH}

echo "=== ENVIRONMENT ==="
printenv

echo "=== START SERVER ==="

# We expect some AGC info in the environment: JOB_QUEUE_ARN and ROOT_DIR
# These come from packages/cdk/lib/env/context-app-parameters.ts
# And also TOIL_AWS_BATCH_JOB_ROLE_ARN must be set in Toil's environment.
# This comes from packages/cdk/lib/stacks/engines/toil-engine-construct.ts
AWS_REGION=$(echo ${JOB_QUEUE_ARN} | cut -f4 -d':')
set -x

export TOIL_WES_BROKER_URL="amqp://guest:guest@localhost:5672//"
export TOIL_WES_JOB_STORE_TYPE="aws"

concurrently -n rabbitmq,celery,toil \
    "rabbitmq-server" \
    "celery --broker=${TOIL_WES_BROKER_URL} -A toil.server.celery_app worker --loglevel=INFO" \
    "toil server --debug --host=0.0.0.0 --port=8000 --dest_bucket_base=${ROOT_DIR}/output --state_store=${ROOT_DIR}/state --wes_dialect agc --opt=--batchSystem=aws_batch '--opt=--awsBatchQueue=${JOB_QUEUE_ARN}' '--opt=--awsBatchRegion=${AWS_REGION}' --opt=--disableCaching"